Assigned Readings:Chapter 12. Resource Management Initial Postings: Read and reflect on the assigned readings for the week. Then post what you thought was the most important concept(s), method(s), term(s), and/or any other thing that you felt was worthy of your understanding in each assigned textbook chapter.Your initial post should be based upon the assigned reading for […]
EMBL (European Molecular Biology Laboratory) and EBI (European Bioinformatics Institute) are basically the equivalent of NCBI here in the US. They hold the same data but store the data in a different format. Your task is to parse out an EMBL record (see file attached) just like we did for GenBank records in the […]
You will write a Python program that finds all the ORFs in a genomic sequence. A genomic sequence has 6 reading frames, corresponding to the six possible ways of translating the sequence into three-letter codons. Frame 1 treats each group of three bases as a codon, starting from the first base. Frame 2 starts at […]
Table of Contents
Discussion 12- Exe Project
/in Computer Science /by NewOneAssigned Readings:Chapter 12. Resource Management Initial Postings: Read and reflect on the assigned readings for the week. Then post what you thought was the most important concept(s), method(s), term(s), and/or any other thing that you felt was worthy of your understanding in each assigned textbook chapter.Your initial post should be based upon the assigned reading for […]
Python
/in Computer Science /by NewOneEMBL (European Molecular Biology Laboratory) and EBI (European Bioinformatics Institute) are basically the equivalent of NCBI here in the US. They hold the same data but store the data in a different format. Your task is to parse out an EMBL record (see file attached) just like we did for GenBank records in the […]
ORF Python
/in Computer Science /by NewOneYou will write a Python program that finds all the ORFs in a genomic sequence. A genomic sequence has 6 reading frames, corresponding to the six possible ways of translating the sequence into three-letter codons. Frame 1 treats each group of three bases as a codon, starting from the first base. Frame 2 starts at […]